Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm9022-201ENSMUST00000182482 992 ntBASIC10.02□□□□□ -0.81
Nkx2-1P50220 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.02□□□□□ -0.81
Nkx2-1P50220 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm27243-201ENSMUST00000183964 521 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm24526-201ENSMUST00000082921 158 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm5356-201ENSMUST00000093326 615 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.01□□□□□ -0.81
Nkx2-1P50220 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx2-1P50220 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms