Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.81□□□□□ -0.52
Sox18P43680 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox18P43680 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox18P43680 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox18P43680 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox18P43680 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.8□□□□□ -0.52
Sox18P43680 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox18P43680 Gm13315-201ENSMUST00000120376 991 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Gm13740-201ENSMUST00000120590 310 ntBASIC11.8□□□□□ -0.52
Sox18P43680 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.8□□□□□ -0.52
Sox18P43680 Gm22442-201ENSMUST00000157256 144 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox18P43680 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Gm37845-201ENSMUST00000194977 355 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Gm42696-201ENSMUST00000199859 1142 ntBASIC11.8□□□□□ -0.52
Sox18P43680 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox18P43680 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gm18041-201ENSMUST00000218210 618 ntBASIC11.8□□□□□ -0.52
Sox18P43680 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC11.8□□□□□ -0.52
Sox18P43680 AC152169.2-201ENSMUST00000224558 613 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox18P43680 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Sox18P43680 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 AC151904.4-201ENSMUST00000219868 1319 ntBASIC11.8□□□□□ -0.52
Sox18P43680 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox18P43680 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.8□□□□□ -0.52
Sox18P43680 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.79□□□□□ -0.52
Sox18P43680 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 AC122539.3-201ENSMUST00000218355 1431 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox18P43680 Mir1192-201ENSMUST00000116976 121 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox18P43680 Gm12314-201ENSMUST00000118104 538 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm7113-201ENSMUST00000120477 958 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm14585-201ENSMUST00000120713 634 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms