Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm42751-201ENSMUST00000198065 559 ntBASIC12.48□□□□□ -0.41
HttP42859 Id2-203ENSMUST00000222667 958 ntBASIC12.48□□□□□ -0.41
HttP42859 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.48□□□□□ -0.41
HttP42859 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.48□□□□□ -0.41
HttP42859 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HttP42859 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
HttP42859 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.47□□□□□ -0.41
HttP42859 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.47□□□□□ -0.41
HttP42859 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.47□□□□□ -0.41
HttP42859 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.47□□□□□ -0.41
HttP42859 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Gm15528-201ENSMUST00000117821 864 ntBASIC12.47□□□□□ -0.41
HttP42859 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.47□□□□□ -0.41
HttP42859 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Gm43564-201ENSMUST00000196185 211 ntBASIC12.47□□□□□ -0.41
HttP42859 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.47□□□□□ -0.41
HttP42859 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.47□□□□□ -0.41
HttP42859 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HttP42859 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HttP42859 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HttP42859 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.46□□□□□ -0.41
HttP42859 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.46□□□□□ -0.41
HttP42859 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.46□□□□□ -0.41
HttP42859 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
HttP42859 Gm13505-201ENSMUST00000121666 817 ntBASIC12.46□□□□□ -0.41
HttP42859 Gm23694-201ENSMUST00000179335 110 ntBASIC12.46□□□□□ -0.41
HttP42859 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.46□□□□□ -0.41
HttP42859 Gm43811-201ENSMUST00000202862 695 ntBASIC12.46□□□□□ -0.41
HttP42859 Gm5996-201ENSMUST00000211110 718 ntBASIC12.46□□□□□ -0.41
HttP42859 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.46□□□□□ -0.41
HttP42859 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.46□□□□□ -0.41
HttP42859 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.46□□□□□ -0.41
HttP42859 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HttP42859 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.46□□□□□ -0.42
HttP42859 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.46□□□□□ -0.42
HttP42859 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.46□□□□□ -0.42
HttP42859 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Gm7445-201ENSMUST00000192115 340 ntBASIC12.46□□□□□ -0.42
HttP42859 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
HttP42859 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HttP42859 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HttP42859 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.45□□□□□ -0.42
HttP42859 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms