Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdh4P39038 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdh4P39038 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdh4P39038 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cdh4P39038 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdh4P39038 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdh4P39038 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Gm26361-201ENSMUST00000158868 186 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Gm32999-201ENSMUST00000192693 562 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Gm18711-201ENSMUST00000199341 750 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdh4P39038 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Cdh4P39038 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdh4P39038 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.62□□□□□ -0.55
Cdh4P39038 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh4P39038 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdh4P39038 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Cdh4P39038 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Gm11989-201ENSMUST00000117240 672 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Gm14130-201ENSMUST00000118417 987 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Gm11362-201ENSMUST00000118838 850 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Gm15808-201ENSMUST00000119046 604 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Gm25700-201ENSMUST00000177693 110 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Gm38241-201ENSMUST00000192641 898 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.61□□□□□ -0.55
Cdh4P39038 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Cdh4P39038 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdh4P39038 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Cdh4P39038 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdh4P39038 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cdh4P39038 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdh4P39038 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh4P39038 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh4P39038 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh4P39038 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms