Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox5P35710 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Sox5P35710 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.2□□□□□ -0.3
Sox5P35710 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox5P35710 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox5P35710 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sox5P35710 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Sox5P35710 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.19□□□□□ -0.3
Sox5P35710 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.19□□□□□ -0.3
Sox5P35710 Rprl1-201ENSMUST00000158050 327 ntBASIC13.19□□□□□ -0.3
Sox5P35710 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Gm18711-201ENSMUST00000199341 750 ntBASIC13.19□□□□□ -0.3
Sox5P35710 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sox5P35710 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox5P35710 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox5P35710 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.19□□□□□ -0.3
Sox5P35710 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox5P35710 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox5P35710 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox5P35710 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.19□□□□□ -0.3
Sox5P35710 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.18□□□□□ -0.3
Sox5P35710 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sox5P35710 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox5P35710 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox5P35710 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox5P35710 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Gm5706-201ENSMUST00000181525 993 ntBASIC13.18□□□□□ -0.3
Sox5P35710 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox5P35710 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox5P35710 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox5P35710 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox5P35710 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.18□□□□□ -0.3
Sox5P35710 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox5P35710 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox5P35710 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sox5P35710 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.17□□□□□ -0.3
Sox5P35710 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
Sox5P35710 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Sox5P35710 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.17□□□□□ -0.3
Sox5P35710 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Sox5P35710 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox5P35710 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox5P35710 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms