Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.55□□□□□ -0.88
Rom1P32958 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rom1P32958 Gm13612-201ENSMUST00000119276 390 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Rom1P32958 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Gm8018-201ENSMUST00000173536 789 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Rom1P32958 Gm27702-201ENSMUST00000184512 56 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Gm37497-201ENSMUST00000195830 798 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rom1P32958 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.55□□□□□ -0.88
Rom1P32958 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rom1P32958 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.55□□□□□ -0.88
Rom1P32958 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.55□□□□□ -0.88
Rom1P32958 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rom1P32958 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rom1P32958 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rom1P32958 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.54□□□□□ -0.88
Rom1P32958 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Gm12314-201ENSMUST00000118104 538 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Gm11597-201ENSMUST00000121423 964 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.54□□□□□ -0.88
Rom1P32958 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.54□□□□□ -0.88
Rom1P32958 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.54□□□□□ -0.88
Rom1P32958 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Gm5706-201ENSMUST00000181525 993 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Gm42693-201ENSMUST00000196779 631 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.54□□□□□ -0.88
Rom1P32958 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Gm45930-201ENSMUST00000221330 292 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms