Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.13□□□□□ -0.63
Nedd8P29595 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nedd8P29595 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nedd8P29595 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nedd8P29595 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.12□□□□□ -0.63
Nedd8P29595 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nedd8P29595 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Nedd8P29595 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Rmrp-201ENSMUST00000157463 271 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Itm2b-204ENSMUST00000228637 783 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm24136-201ENSMUST00000083374 165 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.12□□□□□ -0.63
Nedd8P29595 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nedd8P29595 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nedd8P29595 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.12□□□□□ -0.63
Nedd8P29595 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nedd8P29595 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.11□□□□□ -0.63
Nedd8P29595 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.11□□□□□ -0.63
Nedd8P29595 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.11□□□□□ -0.63
Nedd8P29595 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nedd8P29595 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.11□□□□□ -0.63
Nedd8P29595 Gm27618-201ENSMUST00000183671 60 ntBASIC11.11□□□□□ -0.63
Nedd8P29595 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.11□□□□□ -0.63
Nedd8P29595 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Gm8420-201ENSMUST00000097103 598 ntBASIC11.11□□□□□ -0.63
Nedd8P29595 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nedd8P29595 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Nedd8P29595 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms