Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.16□□□□□ -0.46
RxrbP28704 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RxrbP28704 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RxrbP28704 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
RxrbP28704 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RxrbP28704 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.15□□□□□ -0.46
RxrbP28704 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.15□□□□□ -0.46
RxrbP28704 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.15□□□□□ -0.46
RxrbP28704 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RxrbP28704 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.15□□□□□ -0.46
RxrbP28704 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.15□□□□□ -0.46
RxrbP28704 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.15□□□□□ -0.46
RxrbP28704 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RxrbP28704 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RxrbP28704 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RxrbP28704 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.47
RxrbP28704 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
RxrbP28704 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
RxrbP28704 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
RxrbP28704 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RxrbP28704 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm24830-201ENSMUST00000102024 166 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Gm13492-201ENSMUST00000119772 665 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm12490-201ENSMUST00000120255 560 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Gm13315-201ENSMUST00000120376 991 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.14□□□□□ -0.47
RxrbP28704 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Gm43002-201ENSMUST00000200310 155 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RxrbP28704 Gm26232-201ENSMUST00000083360 166 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.14□□□□□ -0.47
RxrbP28704 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
RxrbP28704 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RxrbP28704 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms