Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.27□□□□□ -0.29
Pde6bP23440 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pde6bP23440 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.27□□□□□ -0.29
Pde6bP23440 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Pde6bP23440 Gm19087-201ENSMUST00000191430 946 ntBASIC13.27□□□□□ -0.29
Pde6bP23440 Gm43962-201ENSMUST00000203898 190 ntBASIC13.27□□□□□ -0.29
Pde6bP23440 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.27□□□□□ -0.29
Pde6bP23440 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.27□□□□□ -0.29
Pde6bP23440 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pde6bP23440 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.27□□□□□ -0.29
Pde6bP23440 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.27□□□□□ -0.29
Pde6bP23440 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pde6bP23440 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pde6bP23440 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pde6bP23440 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Gm13461-201ENSMUST00000120980 662 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.26□□□□□ -0.29
Pde6bP23440 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.26□□□□□ -0.29
Pde6bP23440 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Mir7677-201ENSMUST00000184226 67 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Gm17827-201ENSMUST00000211825 742 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Pde6bP23440 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.26□□□□□ -0.29
Pde6bP23440 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pde6bP23440 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6bP23440 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Gm13408-201ENSMUST00000119822 798 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 Gm13935-201ENSMUST00000121859 798 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.25□□□□□ -0.29
Pde6bP23440 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.25□□□□□ -0.29
Pde6bP23440 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.25□□□□□ -0.29
Pde6bP23440 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6bP23440 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pde6bP23440 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms