Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl3P10855 Gm9630-201ENSMUST00000178304 885 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Gm5706-201ENSMUST00000181525 993 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.67□□□□□ -0.7
Ccl3P10855 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Gm2875-201ENSMUST00000211333 360 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl3P10855 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl3P10855 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl3P10855 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccl3P10855 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm22711-201ENSMUST00000116890 133 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl3P10855 Mir1956-201ENSMUST00000157748 65 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm28388-201ENSMUST00000186262 437 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Gm17877-201ENSMUST00000192578 814 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl3P10855 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm42657-201ENSMUST00000201746 211 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm44506-201ENSMUST00000206278 965 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Gm17931-201ENSMUST00000208132 634 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccl3P10855 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.66□□□□□ -0.7
Ccl3P10855 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl3P10855 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl3P10855 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl3P10855 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl3P10855 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Ccl3P10855 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.65□□□□□ -0.7
Ccl3P10855 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm25076-201ENSMUST00000104098 132 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms