Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc8P09025 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc8P09025 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc8P09025 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxc8P09025 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.81□□□□□ -0.36
Hoxc8P09025 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc8P09025 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.8□□□□□ -0.36
Hoxc8P09025 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm11244-201ENSMUST00000121243 237 ntBASIC12.8□□□□□ -0.36
Hoxc8P09025 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm5100-201ENSMUST00000195631 589 ntBASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm44315-201ENSMUST00000203041 219 ntBASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.8□□□□□ -0.36
Hoxc8P09025 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc8P09025 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc8P09025 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.79□□□□□ -0.36
Hoxc8P09025 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.79□□□□□ -0.36
Hoxc8P09025 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc8P09025 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc8P09025 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.79□□□□□ -0.36
Hoxc8P09025 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc8P09025 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc8P09025 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms