Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sod1P08228 Olfr584-201ENSMUST00000098210 964 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Map1b-203ENSMUST00000223725 2669 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.31□□□□□ -0.6
Sod1P08228 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.31□□□□□ -0.6
Sod1P08228 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.31□□□□□ -0.6
Sod1P08228 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.31□□□□□ -0.6
Sod1P08228 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Gm37028-201ENSMUST00000194276 107 ntBASIC11.31□□□□□ -0.6
Sod1P08228 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Gm44124-201ENSMUST00000204159 472 ntBASIC11.31□□□□□ -0.6
Sod1P08228 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.31□□□□□ -0.6
Sod1P08228 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.31□□□□□ -0.6
Sod1P08228 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.31□□□□□ -0.6
Sod1P08228 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.31□□□□□ -0.6
Sod1P08228 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sod1P08228 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.31□□□□□ -0.6
Sod1P08228 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.31□□□□□ -0.6
Sod1P08228 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sod1P08228 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.3□□□□□ -0.6
Sod1P08228 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.3□□□□□ -0.6
Sod1P08228 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.3□□□□□ -0.6
Sod1P08228 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sod1P08228 Gm26013-201ENSMUST00000104404 119 ntBASIC11.3□□□□□ -0.6
Sod1P08228 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.3□□□□□ -0.6
Sod1P08228 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.3□□□□□ -0.6
Sod1P08228 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.3□□□□□ -0.6
Sod1P08228 Gm10807-201ENSMUST00000177134 795 ntBASIC11.3□□□□□ -0.6
Sod1P08228 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.3□□□□□ -0.6
Sod1P08228 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sod1P08228 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.3□□□□□ -0.6
Sod1P08228 Gm17877-201ENSMUST00000192578 814 ntBASIC11.3□□□□□ -0.6
Sod1P08228 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.3□□□□□ -0.6
Sod1P08228 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sod1P08228 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sod1P08228 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sod1P08228 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sod1P08228 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms