Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.81□□□□□ -0.68
P06344 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
P06344 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.81□□□□□ -0.68
P06344 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.81□□□□□ -0.68
P06344 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.81□□□□□ -0.68
P06344 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.81□□□□□ -0.68
P06344 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06344 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
P06344 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
P06344 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
P06344 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.8□□□□□ -0.68
P06344 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.8□□□□□ -0.68
P06344 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.8□□□□□ -0.68
P06344 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
P06344 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.8□□□□□ -0.68
P06344 Rps4l-202ENSMUST00000204242 789 ntBASIC10.8□□□□□ -0.68
P06344 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P06344 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.8□□□□□ -0.68
P06344 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
P06344 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P06344 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
P06344 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.8□□□□□ -0.68
P06344 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P06344 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06344 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
P06344 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P06344 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
P06344 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.79□□□□□ -0.68
P06344 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.79□□□□□ -0.68
P06344 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P06344 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Gm37666-201ENSMUST00000194110 866 ntBASIC10.79□□□□□ -0.68
P06344 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P06344 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P06344 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P06344 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
P06344 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
P06344 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
P06344 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.79□□□□□ -0.68
P06344 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06344 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
P06344 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
P06344 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms