Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.1□□□□□ -0.79
CfdP03953 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.09□□□□□ -0.79
CfdP03953 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.09□□□□□ -0.79
CfdP03953 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.09□□□□□ -0.79
CfdP03953 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm16215-201ENSMUST00000161990 637 ntBASIC10.09□□□□□ -0.79
CfdP03953 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.09□□□□□ -0.79
CfdP03953 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm38671-201ENSMUST00000200573 130 ntBASIC10.09□□□□□ -0.79
CfdP03953 Gm44958-201ENSMUST00000203734 736 ntBASIC10.09□□□□□ -0.79
CfdP03953 Gm6007-201ENSMUST00000208170 823 ntBASIC10.09□□□□□ -0.79
CfdP03953 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.09□□□□□ -0.79
CfdP03953 Gm19163-201ENSMUST00000223313 780 ntBASIC10.09□□□□□ -0.79
CfdP03953 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.09□□□□□ -0.79
CfdP03953 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.09□□□□□ -0.79
CfdP03953 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.09□□□□□ -0.79
CfdP03953 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CfdP03953 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CfdP03953 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.08□□□□□ -0.8
CfdP03953 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CfdP03953 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Gm11439-201ENSMUST00000118598 409 ntBASIC10.08□□□□□ -0.8
CfdP03953 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Gm8018-201ENSMUST00000173536 789 ntBASIC10.08□□□□□ -0.8
CfdP03953 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.08□□□□□ -0.8
CfdP03953 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CfdP03953 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.08□□□□□ -0.8
CfdP03953 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.08□□□□□ -0.8
CfdP03953 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.08□□□□□ -0.8
CfdP03953 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.08□□□□□ -0.8
CfdP03953 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CfdP03953 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.08□□□□□ -0.8
CfdP03953 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CfdP03953 Gm10146-201ENSMUST00000072739 309 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms