Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.09□□□□□ -0.63
P01852 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01852 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
P01852 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
P01852 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01852 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01852 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.09□□□□□ -0.63
P01852 Gm15808-201ENSMUST00000119046 604 ntBASIC11.09□□□□□ -0.63
P01852 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.09□□□□□ -0.63
P01852 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Gm5070-201ENSMUST00000177599 862 ntBASIC11.09□□□□□ -0.63
P01852 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.09□□□□□ -0.63
P01852 Gm44882-201ENSMUST00000205702 802 ntBASIC11.09□□□□□ -0.63
P01852 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.09□□□□□ -0.63
P01852 Gm45598-202ENSMUST00000210719 986 ntBASIC11.09□□□□□ -0.63
P01852 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.09□□□□□ -0.63
P01852 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.09□□□□□ -0.63
P01852 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.09□□□□□ -0.63
P01852 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P01852 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.09□□□□□ -0.63
P01852 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01852 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01852 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.08□□□□□ -0.64
P01852 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.08□□□□□ -0.64
P01852 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01852 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.08□□□□□ -0.64
P01852 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01852 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01852 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.08□□□□□ -0.64
P01852 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01852 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.08□□□□□ -0.64
P01852 Gm14130-201ENSMUST00000118417 987 ntBASIC11.08□□□□□ -0.64
P01852 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.08□□□□□ -0.64
P01852 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm26361-201ENSMUST00000158868 186 ntBASIC11.08□□□□□ -0.64
P01852 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.08□□□□□ -0.64
P01852 Gm32999-201ENSMUST00000192693 562 ntBASIC11.08□□□□□ -0.64
P01852 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.08□□□□□ -0.64
P01852 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.08□□□□□ -0.64
P01852 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.08□□□□□ -0.64
P01852 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01852 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms