Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC8.84□□□□□ -0.99
TcraP01849 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
TcraP01849 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.84□□□□□ -0.99
TcraP01849 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
TcraP01849 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.84□□□□□ -0.99
TcraP01849 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
TcraP01849 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TcraP01849 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
TcraP01849 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.84□□□□□ -1
TcraP01849 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.83□□□□□ -1
TcraP01849 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.83□□□□□ -1
TcraP01849 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
TcraP01849 Gm12291-201ENSMUST00000121627 311 ntBASIC8.83□□□□□ -1
TcraP01849 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC8.83□□□□□ -1
TcraP01849 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.83□□□□□ -1
TcraP01849 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.83□□□□□ -1
TcraP01849 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Gm28631-201ENSMUST00000190740 334 ntBASIC8.83□□□□□ -1
TcraP01849 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.83□□□□□ -1
TcraP01849 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Gm6218-201ENSMUST00000219812 628 ntBASIC8.83□□□□□ -1
TcraP01849 AC173210.1-201ENSMUST00000222341 1131 ntBASIC8.83□□□□□ -1
TcraP01849 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Mir339-201ENSMUST00000083659 96 ntBASIC8.83□□□□□ -1
TcraP01849 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.83□□□□□ -1
TcraP01849 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC8.83□□□□□ -1
TcraP01849 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
TcraP01849 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC8.83□□□□□ -1
TcraP01849 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.82□□□□□ -1
TcraP01849 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Gm37580-201ENSMUST00000192408 2800 ntBASIC8.82□□□□□ -1
TcraP01849 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
TcraP01849 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.82□□□□□ -1
TcraP01849 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.82□□□□□ -1
TcraP01849 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.82□□□□□ -1
TcraP01849 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms