Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gm12151-201ENSMUST00000121374 290 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Pfdn2O70591 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pfdn2O70591 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm7063-201ENSMUST00000186840 981 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pfdn2O70591 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.2□□□□□ -0.78
Pfdn2O70591 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pfdn2O70591 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfdn2O70591 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm6447-201ENSMUST00000118905 835 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm28631-201ENSMUST00000190740 334 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm37319-201ENSMUST00000193500 636 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm6983-201ENSMUST00000214912 628 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Gm5867-201ENSMUST00000063197 592 ntBASIC10.19□□□□□ -0.78
Pfdn2O70591 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.19□□□□□ -0.78
Pfdn2O70591 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pfdn2O70591 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms