Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm9136-201ENSMUST00000193368 454 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm19187-201ENSMUST00000206781 892 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Gm17931-201ENSMUST00000208132 634 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Gm45224-201ENSMUST00000208203 414 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.2□□□□□ -0.46
Chrna4O70174 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
Chrna4O70174 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chrna4O70174 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.19□□□□□ -0.46
Chrna4O70174 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chrna4O70174 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.19□□□□□ -0.46
Chrna4O70174 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm45598-202ENSMUST00000210719 986 ntBASIC12.19□□□□□ -0.46
Chrna4O70174 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.19□□□□□ -0.46
Chrna4O70174 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.19□□□□□ -0.46
Chrna4O70174 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.19□□□□□ -0.46
Chrna4O70174 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chrna4O70174 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm38317-201ENSMUST00000195564 343 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.18□□□□□ -0.46
Chrna4O70174 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm44967-201ENSMUST00000207047 631 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chrna4O70174 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chrna4O70174 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.18□□□□□ -0.46
Chrna4O70174 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna4O70174 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms