Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm5523-201ENSMUST00000180415 997 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm5706-201ENSMUST00000181525 993 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm27530-201ENSMUST00000184096 98 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm45118-201ENSMUST00000208928 825 ntBASIC10.23□□□□□ -0.77
Cxcl13O55038 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cxcl13O55038 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cxcl13O55038 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm15004-201ENSMUST00000119192 630 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm13461-201ENSMUST00000120980 662 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm9550-201ENSMUST00000161130 862 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
Cxcl13O55038 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cxcl13O55038 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cxcl13O55038 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Cxcl13O55038 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.22□□□□□ -0.77
Cxcl13O55038 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cxcl13O55038 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms