Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm43184-201ENSMUST00000197247 542 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Gm18893-201ENSMUST00000198416 943 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Itgb3O54890 Gm4157-201ENSMUST00000211647 679 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Gm270-201ENSMUST00000223010 976 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Itgb3O54890 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Itgb3O54890 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Itgb3O54890 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.81□□□□□ -0.36
Itgb3O54890 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Itgb3O54890 Gm5706-201ENSMUST00000181525 993 ntBASIC12.81□□□□□ -0.36
Itgb3O54890 AU022133-201ENSMUST00000200601 873 ntBASIC12.81□□□□□ -0.36
Itgb3O54890 Gm26448-201ENSMUST00000082446 203 ntBASIC12.81□□□□□ -0.36
Itgb3O54890 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.81□□□□□ -0.36
Itgb3O54890 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.81□□□□□ -0.36
Itgb3O54890 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Itgb3O54890 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm23596-201ENSMUST00000104304 132 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.8□□□□□ -0.36
Itgb3O54890 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Gm15610-201ENSMUST00000120584 195 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 B9d1os-201ENSMUST00000137010 674 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.8□□□□□ -0.36
Itgb3O54890 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.8□□□□□ -0.36
Itgb3O54890 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Gm17931-201ENSMUST00000208132 634 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Itgb3O54890 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.8□□□□□ -0.36
Itgb3O54890 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Itgb3O54890 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Itgb3O54890 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms