Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Efnb3O35393 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Efnb3O35393 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.56□□□□□ -0.88
Efnb3O35393 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Efnb3O35393 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Efnb3O35393 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Gm4984-201ENSMUST00000115987 360 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm13369-201ENSMUST00000119442 987 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm9083-201ENSMUST00000120423 819 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm11597-201ENSMUST00000121423 964 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Gm23119-201ENSMUST00000158610 140 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm17150-201ENSMUST00000165577 381 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.56□□□□□ -0.88
Efnb3O35393 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Gm19163-201ENSMUST00000223313 780 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Gm10146-201ENSMUST00000072739 309 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.56□□□□□ -0.88
Efnb3O35393 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Efnb3O35393 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.56□□□□□ -0.88
Efnb3O35393 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms