Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm9136-201ENSMUST00000193368 454 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm10012-201ENSMUST00000078252 192 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa8J3QNX5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm22331-201ENSMUST00000158066 136 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm8652-201ENSMUST00000181363 964 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm27437-201ENSMUST00000183429 107 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm45384-201ENSMUST00000210451 277 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm29705-201ENSMUST00000212598 474 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.01□□□□□ -0.65
Shisa8J3QNX5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa8J3QNX5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm10686-201ENSMUST00000215389 3247 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms