Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm9116-201ENSMUST00000192400 1018 ntBASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm42816-201ENSMUST00000198433 325 ntBASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Gm7278-201ENSMUST00000119836 1401 ntBASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc180J3QNE4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Gm43912-201ENSMUST00000204352 538 ntBASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 CT009527.1-201ENSMUST00000224205 339 ntBASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Gm42943-201ENSMUST00000199676 3242 ntBASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Ksr1-207ENSMUST00000226282 5260 ntBASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc180J3QNE4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Gm12990-201ENSMUST00000120372 468 ntBASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Gm17709-201ENSMUST00000174536 1096 ntBASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc180J3QNE4 Gm25053-201ENSMUST00000103982 133 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm25922-201ENSMUST00000104281 130 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm24679-201ENSMUST00000158762 111 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm25053-202ENSMUST00000199731 132 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm18463-201ENSMUST00000207258 474 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm18460-201ENSMUST00000208088 464 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm45592-201ENSMUST00000209605 1043 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 AC165154.1-201ENSMUST00000226661 340 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm9873-201ENSMUST00000063891 1097 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm42480-201ENSMUST00000198434 2595 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc180J3QNE4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Gm10169-201ENSMUST00000121822 348 ntBASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Gm19587-201ENSMUST00000191395 545 ntBASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Gm18561-201ENSMUST00000206027 804 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms