Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm13094-201ENSMUST00000117930 409 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm14892-201ENSMUST00000117636 267 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm14270-201ENSMUST00000118388 846 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm13981-201ENSMUST00000122360 447 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm13827-201ENSMUST00000148801 372 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm18367-201ENSMUST00000176139 600 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Gm9797-202ENSMUST00000218003 294 ntBASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp9yF8VPU6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Matn2-206ENSMUST00000228570 2798 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm2474-201ENSMUST00000195162 559 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm24231-201ENSMUST00000104315 133 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm10169-201ENSMUST00000121822 348 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm22379-201ENSMUST00000157480 131 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm30055-201ENSMUST00000203175 803 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gm21451-201ENSMUST00000111062 2775 ntBASIC9.61□□□□□ -0.87
Usp9yF8VPU6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9yF8VPU6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms