Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Atf6F6VAN0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Gm8712-201ENSMUST00000221090 701 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.44□□□□□ -0.42
Atf6F6VAN0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atf6F6VAN0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm23270-201ENSMUST00000104055 131 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm18711-201ENSMUST00000199341 750 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm19994-201ENSMUST00000217086 586 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atf6F6VAN0 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.43□□□□□ -0.42
Atf6F6VAN0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms