Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm29763-201ENSMUST00000205306 616 ntBASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Hfm1D3Z4R1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Gm42430-201ENSMUST00000197209 616 ntBASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Gm6423-201ENSMUST00000204315 934 ntBASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hfm1D3Z4R1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gm14441-201ENSMUST00000121960 540 ntBASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gm5468-202ENSMUST00000227851 682 ntBASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hfm1D3Z4R1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Hfm1D3Z4R1 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm25604-201ENSMUST00000158359 133 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Mir6941-201ENSMUST00000184711 59 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm9916-201ENSMUST00000192943 1228 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm37852-201ENSMUST00000193027 350 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms