Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Cab39l-206ENSMUST00000225595 1380 ntBASIC6.2□□□□□ -1.42
Ubr4A2AN08 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ubr4A2AN08 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm15615-201ENSMUST00000118876 198 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm14247-201ENSMUST00000120950 237 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm23497-201ENSMUST00000157738 130 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm9034-201ENSMUST00000182071 1005 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm6426-201ENSMUST00000209048 854 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 AC140209.1-203ENSMUST00000227412 1524 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm4960-201ENSMUST00000182928 1001 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm17799-201ENSMUST00000183270 667 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm13034-201ENSMUST00000121342 3177 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm15539-201ENSMUST00000118452 566 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm4866-201ENSMUST00000197408 589 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm18555-201ENSMUST00000197935 584 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Klf10-203ENSMUST00000227920 2144 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm11652-201ENSMUST00000117842 1267 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm11489-201ENSMUST00000118342 499 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm8876-201ENSMUST00000120768 1122 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 CR974487.1-201ENSMUST00000220984 413 ntBASIC6.19□□□□□ -1.42
Ubr4A2AN08 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ubr4A2AN08 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ubr4A2AN08 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ubr4A2AN08 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ubr4A2AN08 Gm8754-201ENSMUST00000118391 520 ntBASIC6.18□□□□□ -1.42
Ubr4A2AN08 Gm7571-201ENSMUST00000120252 927 ntBASIC6.18□□□□□ -1.42
Ubr4A2AN08 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ubr4A2AN08 Gm17221-201ENSMUST00000163909 481 ntBASIC6.18□□□□□ -1.42
Ubr4A2AN08 Gm17073-201ENSMUST00000168069 556 ntBASIC6.18□□□□□ -1.42
Ubr4A2AN08 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC6.18□□□□□ -1.42
Ubr4A2AN08 Gm38328-201ENSMUST00000195582 317 ntBASIC6.18□□□□□ -1.42
Ubr4A2AN08 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms