Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc112A0AUP1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Mir1247-201ENSMUST00000116706 82 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm14247-201ENSMUST00000120950 237 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Rprl1-201ENSMUST00000158050 327 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm9136-201ENSMUST00000193368 454 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc112A0AUP1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc112A0AUP1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms