Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc194A0A140LIT1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Gm5370-201ENSMUST00000187187 574 ntBASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc194A0A140LIT1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc194A0A140LIT1 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc194A0A140LIT1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms