Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm13689-201ENSMUST00000119360 685 ntBASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm12341-201ENSMUST00000119724 503 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm14057-201ENSMUST00000120631 482 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm12151-201ENSMUST00000121374 290 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm6152-201ENSMUST00000151704 340 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mir7654-201ENSMUST00000185082 70 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm42612-201ENSMUST00000197986 623 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm43170-201ENSMUST00000199827 612 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm7730-201ENSMUST00000212486 454 ntBASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms