Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm37513-201ENSMUST00000194830 2268 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm38378-201ENSMUST00000195153 2268 ntBASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.8□□□□□ -1
Trav9n-2A0A0G2JDP3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm43051-201ENSMUST00000201096 2678 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm11531-201ENSMUST00000117614 555 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm13786-201ENSMUST00000122371 333 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm42599-201ENSMUST00000201308 469 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm18935-201ENSMUST00000212692 664 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm5950-201ENSMUST00000213337 772 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm13722-201ENSMUST00000117964 3066 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav9n-2A0A0G2JDP3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm19817-201ENSMUST00000199764 2132 ntBASIC8.78□□□□□ -1
Trav9n-2A0A0G2JDP3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms