Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5-4A0A075B652 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm15824-201ENSMUST00000119516 955 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm16379-201ENSMUST00000161469 348 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm8762-201ENSMUST00000193486 339 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm5781-201ENSMUST00000219792 443 ntBASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5-4A0A075B652 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm25261-201ENSMUST00000157416 134 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Gm8227-201ENSMUST00000223306 571 ntBASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5-4A0A075B652 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms