Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm13453-201ENSMUST00000118708 357 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm27618-201ENSMUST00000183671 60 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm38294-201ENSMUST00000192831 381 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm6458-201ENSMUST00000211573 635 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm8396-201ENSMUST00000057361 823 ntBASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trav8-1A0A075B641 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trav8-1A0A075B641 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Spata33-207ENSMUST00000212760 4074 ntBASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms