Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcb1Q9Z0H3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcb1Q9Z0H3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm9797-202ENSMUST00000218003 294 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcb1Q9Z0H3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Gm19353-201ENSMUST00000184561 445 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Ntng1-201ENSMUST00000051253 327 ntBASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smarcb1Q9Z0H3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12616-201ENSMUST00000118594 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm9550-201ENSMUST00000161130 862 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12624-201ENSMUST00000177615 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12621-201ENSMUST00000177760 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12615-201ENSMUST00000177970 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12622-201ENSMUST00000177975 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12627-201ENSMUST00000178412 382 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms