Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Pfdn5Q9WU28 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.96□□□□□ -0.81
Pfdn5Q9WU28 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Mir7684-201ENSMUST00000183858 60 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm27306-201ENSMUST00000183970 107 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm44069-201ENSMUST00000204898 506 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm5035-201ENSMUST00000215581 927 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm19220-201ENSMUST00000222682 803 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.96□□□□□ -0.82
Pfdn5Q9WU28 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm14921-201ENSMUST00000118643 908 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm24694-201ENSMUST00000180054 110 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm27390-201ENSMUST00000184516 176 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm27663-201ENSMUST00000184839 110 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm29667-201ENSMUST00000190817 490 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm44397-201ENSMUST00000195950 113 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm6983-201ENSMUST00000214912 628 ntBASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pfdn5Q9WU28 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms