Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Gm7730-201ENSMUST00000212486 454 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Rnf4Q9QZS2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rnf4Q9QZS2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms