Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a4Q9QZR9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.51
Col4a4Q9QZR9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col4a4Q9QZR9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Col4a4Q9QZR9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm15136-201ENSMUST00000120552 533 ntBASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.83□□□□□ -0.52
Col4a4Q9QZR9 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm37851-201ENSMUST00000193871 889 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm43564-201ENSMUST00000196185 211 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a4Q9QZR9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm15815-201ENSMUST00000120569 255 ntBASIC11.81□□□□□ -0.52
Col4a4Q9QZR9 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms