Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm12485-201ENSMUST00000119641 291 ntBASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm44771-201ENSMUST00000206975 626 ntBASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trem1Q9JKE2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Trem1Q9JKE2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gm9630-201ENSMUST00000178304 885 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Spata33-207ENSMUST00000212760 4074 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms