Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-4Q9EQM3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm14760-201ENSMUST00000121831 999 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm22146-201ENSMUST00000157397 288 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm44315-201ENSMUST00000203041 219 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-4Q9EQM3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm13351-201ENSMUST00000118087 414 ntBASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm13117-201ENSMUST00000120894 691 ntBASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-4Q9EQM3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-4Q9EQM3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-4Q9EQM3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-4Q9EQM3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-4Q9EQM3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms