Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Gm8396-201ENSMUST00000057361 823 ntBASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sf3a3Q9D554 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Erich3-203ENSMUST00000189969 3460 ntBASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Gm12151-201ENSMUST00000121374 290 ntBASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sf3a3Q9D554 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3a3Q9D554 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3a3Q9D554 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms