Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm5706-201ENSMUST00000181525 993 ntBASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm25857-201ENSMUST00000082788 129 ntBASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrc40Q9CRC8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm13297-201ENSMUST00000120205 934 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm26956-201ENSMUST00000182176 986 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrc40Q9CRC8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lrrc40Q9CRC8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms