Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm38117-201ENSMUST00000194653 939 ntBASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm12783-201ENSMUST00000121425 397 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm12030-201ENSMUST00000121917 223 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm7150-201ENSMUST00000122032 981 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm9135-201ENSMUST00000182963 990 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm37981-201ENSMUST00000194280 535 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cldnd1Q9CQX5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm8342-201ENSMUST00000209839 757 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldnd1Q9CQX5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms