Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
RTRAFQ9CQE8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.84□□□□□ -0.84
RTRAFQ9CQE8 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Gm20445-201ENSMUST00000061905 565 ntBASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTRAFQ9CQE8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm14350-201ENSMUST00000116642 640 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm12384-201ENSMUST00000119228 919 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm11594-201ENSMUST00000122313 162 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm23363-201ENSMUST00000175024 79 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Gm9797-201ENSMUST00000052902 613 ntBASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTRAFQ9CQE8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms