Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Gm10339-203ENSMUST00000225409 1671 ntBASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Rpl39lQ9CQD0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Mir449b-201ENSMUST00000104833 80 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm23363-201ENSMUST00000175024 79 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm27680-201ENSMUST00000184192 160 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm5279-201ENSMUST00000199575 745 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm43416-201ENSMUST00000201916 1015 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm10459-201ENSMUST00000202708 1155 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm43760-201ENSMUST00000202120 3015 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm37969-201ENSMUST00000195777 3409 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Rpl39lQ9CQD0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Gm43522-201ENSMUST00000196697 1922 ntBASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rpl39lQ9CQD0 Gm43860-201ENSMUST00000201742 2705 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms