Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Mir1938-201ENSMUST00000158746 100 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm45925-201ENSMUST00000218882 744 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm7046-201ENSMUST00000221351 977 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.88□□□□□ -0.51
Trim16Q99PP9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim16Q99PP9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm10434-201ENSMUST00000101158 471 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm18935-201ENSMUST00000212692 664 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm10608-202ENSMUST00000213924 676 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.87□□□□□ -0.51
Trim16Q99PP9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim16Q99PP9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms