Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Trim34aQ99PP6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim34aQ99PP6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim34aQ99PP6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim34aQ99PP6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim34aQ99PP6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm8737-201ENSMUST00000122208 642 ntBASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm4310-201ENSMUST00000177847 889 ntBASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm5714-201ENSMUST00000197343 566 ntBASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Snora73b-201ENSMUST00000083419 205 ntBASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.92□□□□□ -0.02
Trim34aQ99PP6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim34aQ99PP6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm14193-201ENSMUST00000105067 153 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm11628-201ENSMUST00000117568 171 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm12579-201ENSMUST00000118040 783 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm8731-201ENSMUST00000118088 412 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm43058-201ENSMUST00000197645 625 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Trim34aQ99PP6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim34aQ99PP6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms