Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm8384-201ENSMUST00000190905 704 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm23769-201ENSMUST00000104441 121 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gm16219-201ENSMUST00000120096 274 ntBASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gm9102-201ENSMUST00000219250 465 ntBASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Matn2-206ENSMUST00000228570 2798 ntBASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh15Q99PJ1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm45310-201ENSMUST00000210436 275 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Mir744-201ENSMUST00000103261 100 ntBASIC13.35□□□□□ -0.27
Pcdh15Q99PJ1 Gm14165-201ENSMUST00000121456 952 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms