Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm23251-201ENSMUST00000103773 110 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm16296-201ENSMUST00000159905 325 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 AY036118-201ENSMUST00000200021 923 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.67□□□□□ -0.7
Scrt1Q99M85 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scrt1Q99M85 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm13035-201ENSMUST00000117496 342 ntBASIC10.66□□□□□ -0.7
Scrt1Q99M85 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm14460-201ENSMUST00000121511 639 ntBASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm19187-201ENSMUST00000206781 892 ntBASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.66□□□□□ -0.7
Scrt1Q99M85 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms