Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm9022-201ENSMUST00000182482 992 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm45331-201ENSMUST00000209868 554 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm10608-202ENSMUST00000213924 676 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm9823-201ENSMUST00000051212 327 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp1b1Q99LU0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm23931-201ENSMUST00000103842 109 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm19309-201ENSMUST00000218295 205 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp1b1Q99LU0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.47□□□□□ -0.57
Chmp1b1Q99LU0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms