Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm3961-201ENSMUST00000204425 994 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm22058-201ENSMUST00000083393 310 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vmp1Q99KU0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm15370-201ENSMUST00000117158 253 ntBASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm13297-201ENSMUST00000120205 934 ntBASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vmp1Q99KU0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms